Aff3-flox Mouse
一般名
Aff3-flox
製品ID
S-CKO-03334
背景情報
C57BL/6JCya
系統ID
CKOCMP-16764-Aff3-B6J-VA
状況
このマウス系統を論文で使用する場合は、「Aff3-flox Mouse(カタログ番号S-CKO-03334)はサイアジェンから購入しました。」と引用してください。
製品タイプ
年齢
遺伝子型
性別
数量
標準的な配送方法では、少なくとも3匹のヘテロ接合体キャリアを保証しています。ホモ接合体キャリアや指定された性別の個体の繁殖サービスも利用可能です。
基本情報
系統名
Aff3-flox
系統ID
CKOCMP-16764-Aff3-B6J-VA
遺伝子名
製品ID
S-CKO-03334
遺伝子別名
Laf4, LAF-4, A730046J16, 3222402O04Rik
遺伝子別名
C57BL/6JCya
NCBI ID
修正
Conditional knockout
染色体
Chr 1
表現型
アプリケーション
--
さらに
系統詳細
EnsemblトランスクリプトID
ENSMUST00000095027
NCBIトランスクリプトID
NM_001290814
ターゲット領域
Exon 2~4
有効領域の大きさ
~2.5 kb
遺伝子研究の概要
AFF3, also known as AF4/FMR2 Family Member 3, is a component of the transcriptional super elongation complex. It plays a role in promoting the expression of genes involved in neurogenesis, development, and is associated with various biological processes such as limb dorsoventral patterning, immunoglobulin class switch recombination, and maintaining the mono-allelic expression pattern of XIST [5,6,3,4,7].
In gastric cancer, AFF3 is significantly downregulated in tumor tissues, yet higher expression is related to worse clinicopathological characteristics and prognosis. It may regulate immune cells in the tumor microenvironment and is positively correlated with tumor-infiltrating immune cells, immune checkpoints, tumor mutational burden, and microsatellite instability, suggesting its potential as a biomarker and immunotherapy target [1].
In KINSSHIP syndrome, caused by de novo variants in the degron of AFF3, mouse knock-ins and zebrafish overexpression showed that increased AFF3 levels have pathological effects. Additionally, in zebrafish, knockdowns led to neurological defects that could be rescued by human AFF3 mRNA, and missense variants in AFF3 did not rescue these phenotypes [2,6].
In prostate cancer, AR-regulated AFF3 is downregulated in castration-resistant prostate cancer. Overexpression of AFF3 restricted cancer cell proliferation and migration, increased enzalutamide sensitivity, and affected fatty acid metabolism and ferroptosis by regulating ACSL4 expression [8].
In summary, AFF3 is crucial in multiple biological processes and diseases. Studies using gene-based models like mouse knock-ins, zebrafish overexpression and knockdowns have revealed its role in neurodevelopment-related syndromes, cancer progression, and immune-related functions, providing insights into potential disease mechanisms and therapeutic targets.
References:
1. Zeng, Yuling, Zhang, Xueping, Li, Fazhan, Wang, Ying, Wei, Ming. 2022. AFF3 is a novel prognostic biomarker and a potential target for immunotherapy in gastric cancer. In Journal of clinical laboratory analysis, 36, e24437. doi:10.1002/jcla.24437. https://pubmed.ncbi.nlm.nih.gov/35478418/
2. Bassani, Sissy, Chrast, Jacqueline, Ambrosini, Giovanna, Guex, Nicolas, Reymond, Alexandre. 2024. Variant-specific pathophysiological mechanisms of AFF3 differently influence transcriptome profiles. In Genome medicine, 16, 72. doi:10.1186/s13073-024-01339-y. https://pubmed.ncbi.nlm.nih.gov/38811945/
3. Khan, Hammal, Koh, Glenn, Chong, Angie En Qi, Ahmad, Wasim, Xue, Shifeng. 2022. A novel variant in AFF3 underlying isolated syndactyly. In Clinical genetics, 103, 341-345. doi:10.1111/cge.14254. https://pubmed.ncbi.nlm.nih.gov/36273379/
4. Tsukumo, Shin-Ichi, Subramani, Poorani Ganesh, Seija, Noé, Di Noia, Javier M, Yasutomo, Koji. 2022. AFF3, a susceptibility factor for autoimmune diseases, is a molecular facilitator of immunoglobulin class switch recombination. In Science advances, 8, eabq0008. doi:10.1126/sciadv.abq0008. https://pubmed.ncbi.nlm.nih.gov/36001653/
5. Inoue, Yuta, Tsuchida, Naomi, Okamoto, Nobuhiko, Uchiyama, Yuri, Matsumoto, Naomichi. 2023. Three KINSSHIP syndrome patients with mosaic and germline AFF3 variants. In Clinical genetics, 103, 590-595. doi:10.1111/cge.14292. https://pubmed.ncbi.nlm.nih.gov/36576140/
6. Voisin, Norine, Schnur, Rhonda E, Douzgou, Sofia, Chung, Wendy K, Reymond, Alexandre. . Variants in the degron of AFF3 are associated with intellectual disability, mesomelic dysplasia, horseshoe kidney, and epileptic encephalopathy. In American journal of human genetics, 108, 857-873. doi:10.1016/j.ajhg.2021.04.001. https://pubmed.ncbi.nlm.nih.gov/33961779/
7. Zhang, Yue, Wang, Chao, Liu, Xiaoxu, Luo, Zhuojuan, Lin, Chengqi. . AFF3-DNA methylation interplay in maintaining the mono-allelic expression pattern of XIST in terminally differentiated cells. In Journal of molecular cell biology, 11, 761-769. doi:10.1093/jmcb/mjy074. https://pubmed.ncbi.nlm.nih.gov/30535390/
8. Fan, Aoyu, Li, Yunpeng, Zhang, Yunyan, Ma, Zhongliang, Chen, Wei. 2024. Loss of AR-regulated AFF3 contributes to prostate cancer progression and reduces ferroptosis sensitivity by downregulating ACSL4 based on single-cell sequencing analysis. In Apoptosis : an international journal on programmed cell death, 29, 1679-1695. doi:10.1007/s10495-024-01941-w. https://pubmed.ncbi.nlm.nih.gov/38478171/
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